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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.3.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.569EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.524EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.2.3.21EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
A.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.530EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.1.17.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.2.75.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
CH.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.570EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.633EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
DD.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.136EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.23EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.370EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.118EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.137EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.309EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.632EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.72EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.108EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.332EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.42.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBB.1.38.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
N/AEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BQ.1.1.73EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
DW.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BR.5.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.2.75.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XAKEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XAAEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BQ.1.30EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BQ.1.1.50EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.5.1.36EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XBB.1.23EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.177.64EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AH.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.327EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.396EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.129EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AK.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.20EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.221.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.224EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.14EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BF.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.4.6.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XBJEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
EJ.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XBB.1.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used