Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.181EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.37EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BN.1.2.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
CQ.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
CH.1.1.24EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.5.2.43EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.5.2.19EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.38.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.7.19.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BQ.1.1.43EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.5.2.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.7.23EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.450EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.130EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.444EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AW.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.268EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.344EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.103EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.485EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.119EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.276EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.111EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.515EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.287EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.431EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.170EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.23EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.506EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.438.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.27EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.30EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.188EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.39EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.50EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-21683South Korea
B.1.494EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.167EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.267EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.165EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.554EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.243.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.2.5.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.118EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.501EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.226EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.546EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.194EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used