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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.41EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.2.75.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.5.1.20EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
CR.1.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
DV.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BT.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.359EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BN.1.5.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.2.66EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.485EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
CP.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.177.73EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.112.2 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.13EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Q.8 (Alpha)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.122.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.1.23EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.134EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.39.1.3 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BN.1.3.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
C.38EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.1.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XBC.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Q.2 (Alpha)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BL.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
M.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.82 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.30EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.35EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.23.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.466.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.213EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.56 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.39.1.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.91.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.4.14 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.2.3.16EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.177.41EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.375EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BL.1.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.2.75.9EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XBHEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BL.1.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BQ.1.1.78EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.9.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BQ.1.1.64EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XBC.1.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.221.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
DP.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used