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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
KT.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.3.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCCNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FK.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.21.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FP.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.92NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.42NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.106NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FE.1.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FT.3.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.4.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HS.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.73NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.20.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.110NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.86.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GN.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.8.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HB.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.10.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.89NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HR.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HP.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GW.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCF.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.34NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HY.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JC.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.105NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.9.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GM.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FT.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JD.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HT.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.20NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JH.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CK.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used