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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AZ.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.193NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-18487.6South Korea
BL.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FP.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DA.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.68 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.16.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DN.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.5.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DN.1.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.84 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.99NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.3.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.1.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBF.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CT.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.10.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.79.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.47NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.55NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BY.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EA.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XJNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BR.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBF.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CL.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBF.8.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAUNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.1.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.25.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XADNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XABNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FT.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XALNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBWNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.47NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.251NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used