Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.177.83NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.40NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.4.2.4 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.161NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.58NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.75NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17028.5South Korea
B.1.411NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.217NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.35NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.17 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.41NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.527NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.500NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.147NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.487NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.68NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.121NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AA.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AS.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CJ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BM.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DE.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.75.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BM.1.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBMNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.34NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CB.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BR.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CL.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EF.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BR.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BE.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BH.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BL.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BS.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DC.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used