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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AM.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.15 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.113NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GA.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.5.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.423NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.550NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.261NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.3.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EP.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.15.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XCBNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.15.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CM.8.1.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XSNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.4.7NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.29NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.38NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.32NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.58NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.631NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.627NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.519NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.514NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GT.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.87NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XAPNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BE.1.4.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.2.6.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.123.1 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.9.2.2 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EW.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBF.7NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.37NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BN.1.4.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EW.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CH.1.1.17NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.2.8NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBF.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.132 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.160.17NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.4.1.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-19212.8Germany
XBB.1.19NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
KF.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CS.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-19212.8Germany
BA.2.83NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BJ.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XDGNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GA.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used