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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.69SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.70SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.46SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.37.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.77SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FD.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.80SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.47.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBF.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used