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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCYSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
JN.1.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
EK.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
HV.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BU.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.27.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.54SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
DR.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.59SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.24.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-2575.96South Korea
GK.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBVSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.62SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used