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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XDZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XEBSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.263SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.180SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.464SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EE.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBJ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.2.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BW.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KB.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.23 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.9 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.74 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.621.1 (Mu)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.67SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
CK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
XBB.1.16.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAY.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CJ.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HZ.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
GJ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.101SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.45SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used