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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
KK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.234SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.231SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.517SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.291SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.349SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.314SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.132SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.99.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KT.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.334SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.359SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.302SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.222SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.434SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.467SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.110.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CJ.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.6.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HF.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.42.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.517SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.427 (Epsilon)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.429 (Epsilon)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.166SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.16.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used