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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XCHSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JP.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCT.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.6.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.4.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18353.2South Korea
HH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.85SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FU.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
FY.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.41.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBBSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
FU.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
XBB.1.16.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBL.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.24.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used