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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.99SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GM.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.20.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.110SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.8.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.89SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.3.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCCSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.21.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FP.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.92SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.106SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FT.3.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.4.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HS.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.26.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCPSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.6.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KE.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used