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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GK.1.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LN.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.25.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.16.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.57.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.44.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDD.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KR.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FW.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.63.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JQ.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KT.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LA.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.4.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDSSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LY.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDQ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.5.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.5.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.53.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDQ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used