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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.4.6.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LQ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LY.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MD.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MB.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.10.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.23.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.64SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.68SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.65 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.12.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LZ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KW.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KU.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.4.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GQ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.9.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Q.1 (Alpha)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.46 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.99 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.120.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.528SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.91 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used