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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JC.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.564SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.461SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.486SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.603SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.70SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.606SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.601SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.186SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.543SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.139SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.221SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.362SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.265SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.585SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.351SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.466SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
L.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.339SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.229SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.415SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.370SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.421SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.428.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.612SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.305SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
unclassifiableSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-20215.9South Korea
KS.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used