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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.428.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.459SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.415.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.98SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.566SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.480SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.579SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.11 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.435SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.445SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.124SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.384SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAQSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.569SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.524SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAYSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.467SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.484SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.476SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.404SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.500SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.511SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.428.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.506SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.482SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.335SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.499.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.116SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.528SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.175SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.6.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.483SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.181SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.113SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.594SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.328SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used