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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.63SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.263SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.135SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.516SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.354SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.162SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.426SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.402SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.424SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.264SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.581SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.330SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.205SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDHSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.273SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.13 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.358SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.159SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.43.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.332SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JB.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JW.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.100SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.43.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EU.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.48SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EK.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.66SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.19.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.479SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used