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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.63SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.424SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.89SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
M.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.333SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.429SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.463SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
U.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.373SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.80SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.433SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.6.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBJSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EJ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DQ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.31.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.77SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAY.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BY.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.618SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.458SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
W.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.264.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.190SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.552SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.507SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.178SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.273SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.211SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.474SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.297SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used