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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.85SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.74SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.38.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BT.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.55SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.76SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.36.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.221.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.242SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.449SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.152SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.146SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
D.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.81SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.64SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.327SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.396SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.129SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.221.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.224SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.510SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.91SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.227SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.555SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.513SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XACSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used