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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XDQ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.4.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDK.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.46.4 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.107 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.81 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.117 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.118 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.27 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.617.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.67 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.110 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.39.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
BA.1.1.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
AY.43.4 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.57 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
AY.3.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.43SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.58SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.7.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.42.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used