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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JN.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.16 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.10.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.5 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.34.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.2.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.55SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.57SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.49SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.69SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.45 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.70 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.26.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.5 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.108 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.32 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.46.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.6 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.75.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.37 (Lambda)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.45SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.5.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CR.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BT.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Q.4 (Alpha)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.442SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.1 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.2.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.600SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.12 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.525 (Eta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.6 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used