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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.46SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.389SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.549SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.43.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.558SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.518SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.368SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.404SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.306SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.328SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.533SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.525SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.480SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.214SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.236SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.153SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.302SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.194SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.55SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.51SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.308SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.138SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.255SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.303SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AA.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.173SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.362.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.48SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.520SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.38SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.521SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.383SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.304SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.214.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.577SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.639SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.2.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AZ.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.270SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.227SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
U.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used