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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BN.1.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EW.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.68 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.16.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DN.1.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.5.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DN.1.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.84 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.99SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAY.1.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GY.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBF.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GA.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
XAY.1.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.38SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CT.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.10.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.47SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAY.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.55SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BY.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EA.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XJSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BR.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBF.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBF.8.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAUSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAY.1.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.25.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XADSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XABSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FT.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XALSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBWSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.15.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.59 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBRSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used