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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HK.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XDCSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.15.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JR.1.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JD.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JG.3.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
KE.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HV.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.86.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XDD.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.16.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.5.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HW.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HN.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GE.1.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EG.5.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XCHSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JF.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DV.7.1.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DV.7.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JP.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XCT.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GS.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
FY.5.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FE.1.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.3.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
FL.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.3.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EG.5.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.5.1.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DV.6.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FK.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GY.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBC.1.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.4.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HH.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GY.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HH.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.1.5.85SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used