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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.42SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.4.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.31SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HG.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EG.4.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.9.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XDBSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GA.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.35SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GM.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.1.16.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.1.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.49SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBL.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FR.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
FL.18.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.544SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.448SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.425SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.354SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.503SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.31SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.623SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.214.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.588SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.210SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FU.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FV.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GJ.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.1.16.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.22.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FE.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBL.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GR.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used