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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BS.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.7.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.254NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.36.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.122.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.79 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
AQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.11 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.428NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.355NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.34.1.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.71 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.33.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.465NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.2.5 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XFNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
S.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.221.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.215NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.82NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.462NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.218NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.74NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.237NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBNNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.356NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.462NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used