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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.84NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FG.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.67NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.88NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CJ.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HZ.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.11.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used