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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HK.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ED.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCVNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.31.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HR.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HS.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HU.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBVNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EK.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BU.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KK.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used