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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.36.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.23.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.21.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDBNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.18.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
EG.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.5.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.53.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDQ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
HV.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.9.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.47.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.64.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
KR.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KZ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used