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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBDNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.106 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.346NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.93NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.512NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.349NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.265NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19749.2South Korea
B.1.401NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.362NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.11.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
FL.32.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HC.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.93 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.31.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
EG.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
B.1.1.418NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.389NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.363NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.405NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.282NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.228NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.174NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.88 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JS.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.2.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HG.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCQNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.41.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used