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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EK.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.64NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.68NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.65 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.466NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
L.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.339NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.229NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.415NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.370NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.421NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.428.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.612NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19194.1South Korea
B.1.305NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
unclassifiableNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KS.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCENWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LF.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LQ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MD.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MB.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used