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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.344NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.103NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.485NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.119NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.276NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.319NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.182NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.430NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.331NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
AY.112.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.188NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1480.18South Korea
B.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.494NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.167NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
B.1.267NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.165NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.554NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.243.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.2.5.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.407NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.423NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19749.2South Korea
B.1.281NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.230NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.535NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.564.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.139NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.508NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.94NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.463NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.357NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.318NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.557NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.119NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.160NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.447NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used