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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.90NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.169NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.515NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.287NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.431NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.170NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.506NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.6.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.111NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.336NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.400.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.537NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.548NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
AY.24.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.492NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.540NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.487NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.118NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.501NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.226NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.546NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.194NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
B.1.429.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.9 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.25.1.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.203NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.157NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.176NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.3.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.391NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.393NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.432NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.388NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.112NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.274NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
B.1.515NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
B.1.450NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.130NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.444NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
AW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.268NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used