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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.264NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.581NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19194.1South Korea
B.1.330NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.205NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.177NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.301NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.308NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.210NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.325NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.590NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.116NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.496NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.49 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.507NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.178NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.273NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.211NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.474NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.297NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
AH.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.280NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.597NWon-NGTTGCGACTACGTGATGAGG20552884928830R-18062.4South Korea
BA.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.443NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.595.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.495NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.294NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.453NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.350NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
B.1.304NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.315NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.55NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.422NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.4.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.219NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.208NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used