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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JN.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.29.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.29.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.299NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.55NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.149NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.300NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.179NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.125NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
G.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.438NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.347NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.195NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.321NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.379NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.231NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.67NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.190NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.133NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.466NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.489NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.363NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.95NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.531NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.200NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.85NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.65NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BG.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.74NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.38.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BT.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.55NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used