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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
LB.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.81NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBL.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.28.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FR.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.7.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.18.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.4.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDPNWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
KP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.2.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LU.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LF.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MM.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.7.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.396NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.595.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.311NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used