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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.5.2.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.234NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Z.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
V.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.282NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.131NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.274NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.235NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.65NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
W.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.250NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.63NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.130NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.469NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.80 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.43.8 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.128 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.220NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19943.4South Korea
B.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.257NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.5.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.323NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.105 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.9 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.398NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.94 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.10 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used