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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.5.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-17667.3South Korea
BA.2.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.9.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.6.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XGNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XPNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CQ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
EC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XNNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.111 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used