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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
CH.1.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GM.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.129 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.9.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.4.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.71NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.26.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DS.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BT.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.15 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.348NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.575NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.14 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.7.1 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.2 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used