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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.75EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.51EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.106EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
D.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.593EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.438.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.290EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.341EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.161EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.69 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.407EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.20EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.423EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.281EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.230EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.535EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.24EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.564.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.46EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.139EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.508EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.94EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.463EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.357EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.318EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.557EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.119EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.160EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
D.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.447EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.110.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.180EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.155EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.92EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.145EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.120EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.77EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.504EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.201EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.221EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.410EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.411EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.109EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.361EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.38EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used