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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.400.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.537EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.548EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.24.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.492EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.540EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.487EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.118EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.501EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.226EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.546EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.194EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.429.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.9 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.25.1.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.203EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.157EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.176EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.3.4 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.391EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-1649.2South Korea
B.1.393EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.432EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.388EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.48EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.112EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.274EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.515EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.134EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.393EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.381EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.32EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.516EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.526EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.279EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
N.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.36EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.345EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.53EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.450EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.334EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.589EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.335EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.169EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.43EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.42EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.442EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used