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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.169EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.53EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.528EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.175EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.483EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.181EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.113EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.594EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.328EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.13EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.145EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.214EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.284EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.351.3 (Beta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.318EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
R.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.29 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
ML.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.283EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BE.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.96EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.547EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.247EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.205EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.110EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.434EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.181EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.37EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.513EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.338EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.284EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.9.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.498EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.184EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.187EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
D.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AE.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.110.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.342EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.500EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.511EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.428.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.506EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.482EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used