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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.299EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.55EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.149EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.300EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.179EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.25EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.125EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
G.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.438EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.35EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.120EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AM.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AA.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.249EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AA.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.505EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.74EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-3870.9South Korea
B.1.406EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.115EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.29EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AA.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.178EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.208EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.197EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.491EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
EV.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
P.1.8 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.39.3 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BQ.1.8.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.75.3 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BF.35EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
CY.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
FR.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XBJ.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
CP.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
GJ.1.2.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
CK.1.1.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.2.56.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.7.21EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.7.13.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.37EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
CK.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
CM.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XBC.1.3.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
JN.11.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XDLEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
JN.17EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
AY.29.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used