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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HH.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.22.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HW.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.41.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBBNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.6.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.4.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.85NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FR.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used