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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FL.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.6.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDENWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
KE.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HF.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HW.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCHNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCKNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDCNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
JR.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
JD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used