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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HK.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.5.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
FL.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.108NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.104NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.103NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HC.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.94NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
GJ.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.10.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.41.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
JG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.1.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
FL.33.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FR.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCWNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.2.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JS.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.2.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HG.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCQNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used