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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HN.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20075South Korea
JR.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.1.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-22305.6South Korea
XDA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.58.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
XCMNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.42.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
DV.7.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDDNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.106NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FT.3.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.73NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCDNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.44.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
FL.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.45.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FP.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used