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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BE.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KB.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HF.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.42.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.517NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.427 (Epsilon)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.429 (Epsilon)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.166NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.16.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.9.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.73NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XEBNWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
B.1.263NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.180NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FG.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.34.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.79NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used