Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.9 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.74 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.621.1 (Mu)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.67NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CJ.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.6.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.464NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.234NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.231NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.243NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.517NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.291NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.349NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.314NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.132NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.99.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KT.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.334NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21305.4South Korea
B.1.359NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.302NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.222NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.434NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.467NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EE.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBJ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.2.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BW.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used